Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm12585-201ENSMUST00000117307 290 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm23984-201ENSMUST00000157139 203 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm25144-201ENSMUST00000179561 110 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm25352-201ENSMUST00000179815 110 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccbe1Q3MI99 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm12859-201ENSMUST00000117834 427 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm8420-201ENSMUST00000097103 598 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ccbe1Q3MI99 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms