Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm42670-201ENSMUST00000201816 1292 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm44985-201ENSMUST00000206202 1016 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm6376-201ENSMUST00000209407 580 ntBASIC9.86□□□□□ -0.83
Trim63Q38HM4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim63Q38HM4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gm43347-201ENSMUST00000200226 580 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gm18669-201ENSMUST00000216049 778 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gm17330-201ENSMUST00000221047 165 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 AC134335.2-201ENSMUST00000227660 440 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gm8420-201ENSMUST00000097103 598 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim63Q38HM4 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.85□□□□□ -0.83
Trim63Q38HM4 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms