Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.24□□□□□ -0.45
Ebf1Q07802 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ebf1Q07802 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.23□□□□□ -0.45
Ebf1Q07802 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm13888-201ENSMUST00000119148 422 ntBASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm14460-201ENSMUST00000121511 639 ntBASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm23085-201ENSMUST00000157849 293 ntBASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm6905-201ENSMUST00000205729 511 ntBASIC12.23□□□□□ -0.45
Ebf1Q07802 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.23□□□□□ -0.45
Ebf1Q07802 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.23□□□□□ -0.45
Ebf1Q07802 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ebf1Q07802 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ebf1Q07802 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Ebf1Q07802 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.22□□□□□ -0.45
Ebf1Q07802 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gm24891-201ENSMUST00000104391 136 ntBASIC12.22□□□□□ -0.45
Ebf1Q07802 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.22□□□□□ -0.45
Ebf1Q07802 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.22□□□□□ -0.45
Ebf1Q07802 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gm5733-201ENSMUST00000190232 939 ntBASIC12.22□□□□□ -0.45
Ebf1Q07802 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.22□□□□□ -0.45
Ebf1Q07802 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gm26448-201ENSMUST00000082446 203 ntBASIC12.22□□□□□ -0.45
Ebf1Q07802 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.22□□□□□ -0.45
Ebf1Q07802 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf1Q07802 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf1Q07802 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms