Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Gm5950-201ENSMUST00000213337 772 ntBASIC12.12□□□□□ -0.47
Pfdn6Q03958 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn6Q03958 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.11□□□□□ -0.47
Pfdn6Q03958 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.11□□□□□ -0.47
Pfdn6Q03958 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn6Q03958 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm11531-201ENSMUST00000117614 555 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm12036-201ENSMUST00000120008 530 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm14832-201ENSMUST00000121289 322 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Mir7085-201ENSMUST00000184353 66 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Gm10312-201ENSMUST00000078515 489 ntBASIC12.1□□□□□ -0.47
Pfdn6Q03958 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pfdn6Q03958 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms