Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
GabpaQ00422 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.64□□□□□ -0.23
GabpaQ00422 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
GabpaQ00422 Gm8731-201ENSMUST00000118088 412 ntBASIC13.64□□□□□ -0.23
GabpaQ00422 Gm15207-201ENSMUST00000119259 442 ntBASIC13.64□□□□□ -0.23
GabpaQ00422 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.64□□□□□ -0.23
GabpaQ00422 Gm38117-201ENSMUST00000194653 939 ntBASIC13.64□□□□□ -0.23
GabpaQ00422 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.64□□□□□ -0.23
GabpaQ00422 Gm45398-201ENSMUST00000210561 165 ntBASIC13.64□□□□□ -0.23
GabpaQ00422 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
GabpaQ00422 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
GabpaQ00422 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
GabpaQ00422 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GabpaQ00422 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.64□□□□□ -0.23
GabpaQ00422 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
GabpaQ00422 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.64□□□□□ -0.23
GabpaQ00422 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GabpaQ00422 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
GabpaQ00422 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
GabpaQ00422 Gm22711-201ENSMUST00000116890 133 ntBASIC13.63□□□□□ -0.23
GabpaQ00422 Gm11956-201ENSMUST00000119525 512 ntBASIC13.63□□□□□ -0.23
GabpaQ00422 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.63□□□□□ -0.23
GabpaQ00422 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.63□□□□□ -0.23
GabpaQ00422 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.63□□□□□ -0.23
GabpaQ00422 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.63□□□□□ -0.23
GabpaQ00422 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
GabpaQ00422 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.63□□□□□ -0.23
GabpaQ00422 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
GabpaQ00422 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GabpaQ00422 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.63□□□□□ -0.23
GabpaQ00422 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.62□□□□□ -0.23
GabpaQ00422 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GabpaQ00422 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GabpaQ00422 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm14193-201ENSMUST00000105067 153 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Gm13916-201ENSMUST00000117368 628 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Gm15352-201ENSMUST00000118696 270 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Gm15566-201ENSMUST00000121130 590 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Gm14460-201ENSMUST00000121511 639 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Gm4726-201ENSMUST00000135604 736 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm6019-201ENSMUST00000148369 736 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Mir8115-201ENSMUST00000184992 119 ntBASIC13.62□□□□□ -0.23
GabpaQ00422 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
GabpaQ00422 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms