Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm12266-201ENSMUST00000120311 962 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm9083-201ENSMUST00000120423 819 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm24749-201ENSMUST00000157838 343 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm25732-201ENSMUST00000175168 60 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm43138-201ENSMUST00000199123 708 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.43□□□□□ -0.58
Nkx3-2P97503 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx3-2P97503 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx3-2P97503 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.42□□□□□ -0.58
Nkx3-2P97503 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.42□□□□□ -0.58
Nkx3-2P97503 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx3-2P97503 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Mir6927-201ENSMUST00000184494 71 ntBASIC11.42□□□□□ -0.58
Nkx3-2P97503 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.42□□□□□ -0.58
Nkx3-2P97503 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.42□□□□□ -0.58
Nkx3-2P97503 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.42□□□□□ -0.58
Nkx3-2P97503 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.42□□□□□ -0.58
Nkx3-2P97503 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx3-2P97503 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx3-2P97503 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms