Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Gm15004-201ENSMUST00000119192 630 ntBASIC13.09□□□□□ -0.31
Trim43cP86449 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Gm25668-201ENSMUST00000157700 129 ntBASIC13.09□□□□□ -0.31
Trim43cP86449 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.09□□□□□ -0.31
Trim43cP86449 Gm27320-201ENSMUST00000184892 109 ntBASIC13.09□□□□□ -0.31
Trim43cP86449 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim43cP86449 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim43cP86449 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trim43cP86449 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim43cP86449 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim43cP86449 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43cP86449 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim43cP86449 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim43cP86449 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
Trim43cP86449 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.08□□□□□ -0.32
Trim43cP86449 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim43cP86449 Gm13665-201ENSMUST00000120830 528 ntBASIC13.08□□□□□ -0.32
Trim43cP86449 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.08□□□□□ -0.32
Trim43cP86449 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Mir6420-201ENSMUST00000185032 102 ntBASIC13.08□□□□□ -0.32
Trim43cP86449 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trim43cP86449 Gm43962-201ENSMUST00000203898 190 ntBASIC13.08□□□□□ -0.32
Trim43cP86449 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43cP86449 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim43cP86449 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43cP86449 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.08□□□□□ -0.32
Trim43cP86449 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43cP86449 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trim43cP86449 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trim43cP86449 Gm13296-201ENSMUST00000117854 997 ntBASIC13.07□□□□□ -0.32
Trim43cP86449 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim43cP86449 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim43cP86449 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim43cP86449 Gm45186-201ENSMUST00000206874 478 ntBASIC13.07□□□□□ -0.32
Trim43cP86449 Gm44651-201ENSMUST00000207343 372 ntBASIC13.07□□□□□ -0.32
Trim43cP86449 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43cP86449 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.07□□□□□ -0.32
Trim43cP86449 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.07□□□□□ -0.32
Trim43cP86449 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43cP86449 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim43cP86449 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.07□□□□□ -0.32
Trim43cP86449 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.07□□□□□ -0.32
Trim43cP86449 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43cP86449 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43cP86449 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim43cP86449 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms