Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CiitaP79621 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.02□□□□□ -0.33
CiitaP79621 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Gm9192-201ENSMUST00000183221 985 ntBASIC13.02□□□□□ -0.33
CiitaP79621 Gm37246-201ENSMUST00000192665 835 ntBASIC13.02□□□□□ -0.33
CiitaP79621 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CiitaP79621 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CiitaP79621 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.02□□□□□ -0.33
CiitaP79621 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CiitaP79621 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CiitaP79621 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CiitaP79621 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CiitaP79621 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CiitaP79621 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CiitaP79621 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.01□□□□□ -0.33
CiitaP79621 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.01□□□□□ -0.33
CiitaP79621 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.01□□□□□ -0.33
CiitaP79621 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CiitaP79621 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CiitaP79621 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CiitaP79621 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CiitaP79621 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.01□□□□□ -0.33
CiitaP79621 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.01□□□□□ -0.33
CiitaP79621 Gm42997-202ENSMUST00000200321 985 ntBASIC13.01□□□□□ -0.33
CiitaP79621 Gm3786-201ENSMUST00000202659 378 ntBASIC13.01□□□□□ -0.33
CiitaP79621 Gm43947-201ENSMUST00000203019 959 ntBASIC13.01□□□□□ -0.33
CiitaP79621 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.01□□□□□ -0.33
CiitaP79621 Gm6867-201ENSMUST00000219165 425 ntBASIC13.01□□□□□ -0.33
CiitaP79621 Gm1821-202ENSMUST00000227415 750 ntBASIC13.01□□□□□ -0.33
CiitaP79621 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CiitaP79621 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.01□□□□□ -0.33
CiitaP79621 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
CiitaP79621 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CiitaP79621 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CiitaP79621 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CiitaP79621 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CiitaP79621 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13□□□□□ -0.33
CiitaP79621 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13□□□□□ -0.33
CiitaP79621 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Gm7537-201ENSMUST00000221660 1414 ntBASIC13□□□□□ -0.33
CiitaP79621 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13□□□□□ -0.33
CiitaP79621 Gm15595-201ENSMUST00000120840 961 ntBASIC13□□□□□ -0.33
CiitaP79621 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13□□□□□ -0.33
CiitaP79621 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13□□□□□ -0.33
CiitaP79621 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13□□□□□ -0.33
CiitaP79621 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CiitaP79621 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13□□□□□ -0.33
CiitaP79621 Gm37835-201ENSMUST00000193305 361 ntBASIC13□□□□□ -0.33
CiitaP79621 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13□□□□□ -0.33
CiitaP79621 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms