Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Gm8574-201ENSMUST00000203207 924 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 Gm8956-201ENSMUST00000203939 825 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 AC107763.1-201ENSMUST00000226082 1365 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC9.94□□□□□ -0.82
Usp9xP70398 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Gm14247-201ENSMUST00000120950 237 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Gm24943-201ENSMUST00000158329 433 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Gm37782-201ENSMUST00000194879 678 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 Gm42430-201ENSMUST00000197209 616 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Usp9xP70398 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Usp9xP70398 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.94□□□□□ -0.82
Usp9xP70398 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Usp9xP70398 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Usp9xP70398 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Usp9xP70398 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Defa-ps17-201ENSMUST00000121849 171 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 AC138716.2-201ENSMUST00000226670 1016 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Usp9xP70398 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Usp9xP70398 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp9xP70398 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Usp9xP70398 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Gm14270-201ENSMUST00000118388 846 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.93□□□□□ -0.82
Usp9xP70398 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Usp9xP70398 Gm9081-201ENSMUST00000182346 991 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC9.93□□□□□ -0.82
Usp9xP70398 Gm2345-201ENSMUST00000193451 589 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC9.93□□□□□ -0.82
Usp9xP70398 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.93□□□□□ -0.82
Usp9xP70398 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp9xP70398 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Usp9xP70398 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms