Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13□□□□□ -0.33
PrkcbP68404 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13□□□□□ -0.33
PrkcbP68404 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Gm38228-201ENSMUST00000193169 1293 ntBASIC13□□□□□ -0.33
PrkcbP68404 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
PrkcbP68404 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13□□□□□ -0.33
PrkcbP68404 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
PrkcbP68404 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PrkcbP68404 Gm9796-201ENSMUST00000062249 2250 ntBASIC13□□□□□ -0.33
PrkcbP68404 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PrkcbP68404 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13□□□□□ -0.33
PrkcbP68404 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.99□□□□□ -0.33
PrkcbP68404 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.99□□□□□ -0.33
PrkcbP68404 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.99□□□□□ -0.33
PrkcbP68404 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PrkcbP68404 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Gm4482-201ENSMUST00000200876 742 ntBASIC12.99□□□□□ -0.33
PrkcbP68404 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Gm19287-201ENSMUST00000203190 358 ntBASIC12.99□□□□□ -0.33
PrkcbP68404 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PrkcbP68404 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PrkcbP68404 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.99□□□□□ -0.33
PrkcbP68404 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PrkcbP68404 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
PrkcbP68404 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.98□□□□□ -0.33
PrkcbP68404 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PrkcbP68404 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.98□□□□□ -0.33
PrkcbP68404 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.98□□□□□ -0.33
PrkcbP68404 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Gm14724-201ENSMUST00000118400 537 ntBASIC12.98□□□□□ -0.33
PrkcbP68404 Gm12036-201ENSMUST00000120008 530 ntBASIC12.98□□□□□ -0.33
PrkcbP68404 Gm8566-201ENSMUST00000120174 465 ntBASIC12.98□□□□□ -0.33
PrkcbP68404 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PrkcbP68404 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
PrkcbP68404 Gm8100-201ENSMUST00000182906 988 ntBASIC12.98□□□□□ -0.33
PrkcbP68404 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.98□□□□□ -0.33
PrkcbP68404 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.98□□□□□ -0.33
PrkcbP68404 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.98□□□□□ -0.33
PrkcbP68404 Gm43378-201ENSMUST00000199336 582 ntBASIC12.98□□□□□ -0.33
PrkcbP68404 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms