Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Lsm3P62311 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Lsm3P62311 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Lsm3P62311 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.91□□□□□ -0.66
Lsm3P62311 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.91□□□□□ -0.66
Lsm3P62311 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Lsm3P62311 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Lsm3P62311 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.9□□□□□ -0.66
Lsm3P62311 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Lsm3P62311 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm3P62311 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.9□□□□□ -0.66
Lsm3P62311 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm3P62311 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm3P62311 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.9□□□□□ -0.66
Lsm3P62311 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.9□□□□□ -0.66
Lsm3P62311 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.9□□□□□ -0.66
Lsm3P62311 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Lsm3P62311 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.9□□□□□ -0.66
Lsm3P62311 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Lsm3P62311 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.9□□□□□ -0.66
Lsm3P62311 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Lsm3P62311 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm3P62311 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm3P62311 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Lsm3P62311 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm3P62311 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Lsm3P62311 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm3P62311 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.9□□□□□ -0.67
Lsm3P62311 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm3P62311 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Lsm3P62311 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lsm3P62311 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lsm3P62311 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Lsm3P62311 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.89□□□□□ -0.67
Lsm3P62311 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.89□□□□□ -0.67
Lsm3P62311 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Gm8805-201ENSMUST00000117848 313 ntBASIC10.89□□□□□ -0.67
Lsm3P62311 Gm5687-201ENSMUST00000118252 640 ntBASIC10.89□□□□□ -0.67
Lsm3P62311 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.89□□□□□ -0.67
Lsm3P62311 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Lsm3P62311 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm3P62311 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.89□□□□□ -0.67
Lsm3P62311 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Lsm3P62311 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.89□□□□□ -0.67
Lsm3P62311 Gm8099-201ENSMUST00000200510 742 ntBASIC10.89□□□□□ -0.67
Lsm3P62311 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.89□□□□□ -0.67
Lsm3P62311 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms