Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Gm29705-201ENSMUST00000212598 474 ntBASIC10.7□□□□□ -0.7
Sf3b6P59708 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.7□□□□□ -0.7
Sf3b6P59708 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.7□□□□□ -0.7
Sf3b6P59708 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Gm9396-201ENSMUST00000076703 567 ntBASIC10.7□□□□□ -0.7
Sf3b6P59708 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.7□□□□□ -0.7
Sf3b6P59708 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.7□□□□□ -0.7
Sf3b6P59708 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sf3b6P59708 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm11439-201ENSMUST00000118598 409 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm29127-201ENSMUST00000188304 517 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm45784-201ENSMUST00000188360 142 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.69□□□□□ -0.7
Sf3b6P59708 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.69□□□□□ -0.7
Sf3b6P59708 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sf3b6P59708 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sf3b6P59708 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.68□□□□□ -0.7
Sf3b6P59708 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sf3b6P59708 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms