Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm29076-201ENSMUST00000187689 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm28302-201ENSMUST00000187931 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm28646-201ENSMUST00000188220 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm28205-201ENSMUST00000189177 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm29032-201ENSMUST00000189797 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm28695-201ENSMUST00000190300 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm37448-201ENSMUST00000192795 697 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nup43P59235 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Map1b-203ENSMUST00000223725 2669 ntBASIC11.37□□□□□ -0.59
Nup43P59235 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Nup43P59235 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.37□□□□□ -0.59
Nup43P59235 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Nup43P59235 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nup43P59235 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Nup43P59235 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nup43P59235 Gm22133-201ENSMUST00000102082 109 ntBASIC11.36□□□□□ -0.59
Nup43P59235 Gm11511-201ENSMUST00000118146 540 ntBASIC11.36□□□□□ -0.59
Nup43P59235 Gm12036-201ENSMUST00000120008 530 ntBASIC11.36□□□□□ -0.59
Nup43P59235 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nup43P59235 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.36□□□□□ -0.59
Nup43P59235 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Gm18893-201ENSMUST00000198416 943 ntBASIC11.36□□□□□ -0.59
Nup43P59235 Gm17931-201ENSMUST00000208132 634 ntBASIC11.36□□□□□ -0.59
Nup43P59235 Gm45433-201ENSMUST00000209386 247 ntBASIC11.36□□□□□ -0.59
Nup43P59235 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.36□□□□□ -0.59
Nup43P59235 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.36□□□□□ -0.59
Nup43P59235 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.36□□□□□ -0.59
Nup43P59235 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.36□□□□□ -0.59
Nup43P59235 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.36□□□□□ -0.59
Nup43P59235 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nup43P59235 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.35□□□□□ -0.59
Nup43P59235 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nup43P59235 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nup43P59235 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.35□□□□□ -0.59
Nup43P59235 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms