Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm19994-201ENSMUST00000217086 586 ntBASIC12.29□□□□□ -0.44
Tubgcp3P58854 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.29□□□□□ -0.44
Tubgcp3P58854 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.29□□□□□ -0.44
Tubgcp3P58854 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.29□□□□□ -0.44
Tubgcp3P58854 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.28□□□□□ -0.44
Tubgcp3P58854 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm23270-201ENSMUST00000104055 131 ntBASIC12.28□□□□□ -0.44
Tubgcp3P58854 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm14247-201ENSMUST00000120950 237 ntBASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm15547-201ENSMUST00000122152 333 ntBASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm10312-201ENSMUST00000078515 489 ntBASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.28□□□□□ -0.44
Tubgcp3P58854 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Tubgcp3P58854 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tubgcp3P58854 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms