Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lim2P56563 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lim2P56563 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.03□□□□□ -0.48
Lim2P56563 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.03□□□□□ -0.48
Lim2P56563 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lim2P56563 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Lim2P56563 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.03□□□□□ -0.48
Lim2P56563 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Lim2P56563 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.03□□□□□ -0.48
Lim2P56563 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Lim2P56563 Gm12997-201ENSMUST00000120207 640 ntBASIC12.03□□□□□ -0.48
Lim2P56563 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Gm45433-201ENSMUST00000209386 247 ntBASIC12.03□□□□□ -0.48
Lim2P56563 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.03□□□□□ -0.48
Lim2P56563 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.03□□□□□ -0.48
Lim2P56563 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.03□□□□□ -0.48
Lim2P56563 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.03□□□□□ -0.48
Lim2P56563 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lim2P56563 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lim2P56563 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.03□□□□□ -0.48
Lim2P56563 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lim2P56563 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lim2P56563 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lim2P56563 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lim2P56563 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lim2P56563 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lim2P56563 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lim2P56563 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lim2P56563 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lim2P56563 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Lim2P56563 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.02□□□□□ -0.49
Lim2P56563 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.02□□□□□ -0.49
Lim2P56563 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Lim2P56563 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.02□□□□□ -0.49
Lim2P56563 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.02□□□□□ -0.49
Lim2P56563 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.02□□□□□ -0.49
Lim2P56563 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
Lim2P56563 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Gm8385-201ENSMUST00000058999 643 ntBASIC12.02□□□□□ -0.49
Lim2P56563 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lim2P56563 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lim2P56563 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lim2P56563 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.02□□□□□ -0.49
Lim2P56563 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lim2P56563 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Lim2P56563 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.01□□□□□ -0.49
Lim2P56563 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lim2P56563 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.01□□□□□ -0.49
Lim2P56563 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms