Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CtskP55097 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CtskP55097 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CtskP55097 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.9□□□□□ -0.5
CtskP55097 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Gm23949-201ENSMUST00000104027 127 ntBASIC11.9□□□□□ -0.5
CtskP55097 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CtskP55097 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.9□□□□□ -0.5
CtskP55097 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.9□□□□□ -0.5
CtskP55097 Gm12380-201ENSMUST00000119012 544 ntBASIC11.9□□□□□ -0.5
CtskP55097 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
CtskP55097 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.9□□□□□ -0.5
CtskP55097 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.9□□□□□ -0.5
CtskP55097 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.9□□□□□ -0.5
CtskP55097 Gm5616-201ENSMUST00000165252 384 ntBASIC11.9□□□□□ -0.5
CtskP55097 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.9□□□□□ -0.5
CtskP55097 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.9□□□□□ -0.5
CtskP55097 Gm8741-201ENSMUST00000174736 384 ntBASIC11.9□□□□□ -0.5
CtskP55097 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.9□□□□□ -0.5
CtskP55097 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CtskP55097 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CtskP55097 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CtskP55097 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CtskP55097 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CtskP55097 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
CtskP55097 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
CtskP55097 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
CtskP55097 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.9□□□□□ -0.51
CtskP55097 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
CtskP55097 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
CtskP55097 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CtskP55097 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
CtskP55097 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
CtskP55097 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.51
CtskP55097 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.89□□□□□ -0.51
CtskP55097 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.89□□□□□ -0.51
CtskP55097 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CtskP55097 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
CtskP55097 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.89□□□□□ -0.51
CtskP55097 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.89□□□□□ -0.51
CtskP55097 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.89□□□□□ -0.51
CtskP55097 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.89□□□□□ -0.51
CtskP55097 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.89□□□□□ -0.51
CtskP55097 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
CtskP55097 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.89□□□□□ -0.51
CtskP55097 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
CtskP55097 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.89□□□□□ -0.51
CtskP55097 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.89□□□□□ -0.51
CtskP55097 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Gm9996-201ENSMUST00000070359 913 ntBASIC11.89□□□□□ -0.51
CtskP55097 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.89□□□□□ -0.51
CtskP55097 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CtskP55097 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CtskP55097 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CtskP55097 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.89□□□□□ -0.51
CtskP55097 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CtskP55097 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.88□□□□□ -0.51
CtskP55097 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CtskP55097 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CtskP55097 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CtskP55097 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CtskP55097 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CtskP55097 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms