Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 Gm13668-201ENSMUST00000119237 1001 ntBASIC12□□□□□ -0.49
Atxn1P54254 Gm1848-201ENSMUST00000120711 789 ntBASIC12□□□□□ -0.49
Atxn1P54254 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12□□□□□ -0.49
Atxn1P54254 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Gm23085-201ENSMUST00000157849 293 ntBASIC12□□□□□ -0.49
Atxn1P54254 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Atxn1P54254 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Gm43962-201ENSMUST00000203898 190 ntBASIC12□□□□□ -0.49
Atxn1P54254 Gm9139-201ENSMUST00000218817 700 ntBASIC12□□□□□ -0.49
Atxn1P54254 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12□□□□□ -0.49
Atxn1P54254 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 Gm13384-201ENSMUST00000117166 1344 ntBASIC12□□□□□ -0.49
Atxn1P54254 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12□□□□□ -0.49
Atxn1P54254 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Atxn1P54254 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atxn1P54254 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Matn2-203ENSMUST00000226766 3252 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.99□□□□□ -0.49
Atxn1P54254 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Atxn1P54254 Gm12291-201ENSMUST00000121627 311 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.99□□□□□ -0.49
Atxn1P54254 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.99□□□□□ -0.49
Atxn1P54254 Gm22442-201ENSMUST00000157256 144 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Mir1956-201ENSMUST00000157748 65 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Gm16296-201ENSMUST00000159905 325 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Gm5298-201ENSMUST00000201122 892 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Mt1-202ENSMUST00000211807 1085 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Gm9111-201ENSMUST00000219394 709 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.99□□□□□ -0.49
Atxn1P54254 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Atxn1P54254 Gm25201-201ENSMUST00000083093 170 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Atxn1P54254 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.99□□□□□ -0.49
Atxn1P54254 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Atxn1P54254 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.99□□□□□ -0.49
Atxn1P54254 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atxn1P54254 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.98□□□□□ -0.49
Atxn1P54254 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.98□□□□□ -0.49
Atxn1P54254 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Atxn1P54254 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.98□□□□□ -0.49
Atxn1P54254 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.98□□□□□ -0.49
Atxn1P54254 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Atxn1P54254 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Atxn1P54254 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Atxn1P54254 Gm13315-201ENSMUST00000120376 991 ntBASIC11.98□□□□□ -0.49
Atxn1P54254 Gm22144-201ENSMUST00000157402 102 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms