Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.72□□□□□ -0.37
Shmt1P50431 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.72□□□□□ -0.37
Shmt1P50431 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.72□□□□□ -0.37
Shmt1P50431 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shmt1P50431 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.72□□□□□ -0.37
Shmt1P50431 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Shmt1P50431 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.72□□□□□ -0.37
Shmt1P50431 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shmt1P50431 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.71□□□□□ -0.37
Shmt1P50431 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.71□□□□□ -0.37
Shmt1P50431 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shmt1P50431 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Shmt1P50431 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.71□□□□□ -0.37
Shmt1P50431 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.71□□□□□ -0.37
Shmt1P50431 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.71□□□□□ -0.37
Shmt1P50431 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.71□□□□□ -0.37
Shmt1P50431 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Shmt1P50431 Gm20426-201ENSMUST00000173657 440 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Gm8343-201ENSMUST00000182705 994 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Mir7677-201ENSMUST00000184226 67 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.71□□□□□ -0.37
Shmt1P50431 Gm3332-201ENSMUST00000189337 928 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Gm9136-201ENSMUST00000193368 454 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Gm43378-201ENSMUST00000199336 582 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Gm4157-201ENSMUST00000211647 679 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.71□□□□□ -0.37
Shmt1P50431 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shmt1P50431 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.71□□□□□ -0.37
Shmt1P50431 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shmt1P50431 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt1P50431 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt1P50431 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt1P50431 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt1P50431 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt1P50431 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Shmt1P50431 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt1P50431 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt1P50431 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shmt1P50431 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Shmt1P50431 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shmt1P50431 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Shmt1P50431 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Shmt1P50431 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.7□□□□□ -0.38
Shmt1P50431 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Gm43184-201ENSMUST00000197247 542 ntBASIC12.7□□□□□ -0.38
Shmt1P50431 Gm42599-201ENSMUST00000201308 469 ntBASIC12.7□□□□□ -0.38
Shmt1P50431 Gm43947-201ENSMUST00000203019 959 ntBASIC12.7□□□□□ -0.38
Shmt1P50431 Gm5369-201ENSMUST00000217499 588 ntBASIC12.7□□□□□ -0.38
Shmt1P50431 Gm807-202ENSMUST00000224929 408 ntBASIC12.7□□□□□ -0.38
Shmt1P50431 Gm5705-201ENSMUST00000066241 711 ntBASIC12.7□□□□□ -0.38
Shmt1P50431 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.7□□□□□ -0.38
Shmt1P50431 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.7□□□□□ -0.38
Shmt1P50431 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.7□□□□□ -0.38
Shmt1P50431 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shmt1P50431 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shmt1P50431 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms