Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm7789-202ENSMUST00000211273 1400 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm13315-201ENSMUST00000120376 991 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm1335-201ENSMUST00000121653 386 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm27682-201ENSMUST00000183930 110 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm4034-201ENSMUST00000187674 480 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm22058-201ENSMUST00000083393 310 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.94□□□□□ -0.82
Hist1h1aP43275 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Hist1h1aP43275 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.93□□□□□ -0.82
Hist1h1aP43275 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.93□□□□□ -0.82
Hist1h1aP43275 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Gm43818-201ENSMUST00000200605 466 ntBASIC9.93□□□□□ -0.82
Hist1h1aP43275 Gm18584-201ENSMUST00000203098 964 ntBASIC9.93□□□□□ -0.82
Hist1h1aP43275 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Gm45925-201ENSMUST00000218882 744 ntBASIC9.93□□□□□ -0.82
Hist1h1aP43275 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Hist1h1aP43275 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms