Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Rpl28P41105 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Gm42427-201ENSMUST00000200473 5292 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Gm8038-201ENSMUST00000164674 2044 ntBASIC8.1□□□□□ -1.11
Rpl28P41105 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rpl28P41105 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
Rpl28P41105 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rpl28P41105 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC8.09□□□□□ -1.11
Rpl28P41105 Gm37580-201ENSMUST00000192408 2800 ntBASIC8.09□□□□□ -1.11
Rpl28P41105 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Rpl28P41105 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC8.09□□□□□ -1.11
Rpl28P41105 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Rpl28P41105 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Rpl28P41105 Gm16479-201ENSMUST00000121706 932 ntBASIC8.09□□□□□ -1.11
Rpl28P41105 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Gm17208-201ENSMUST00000168388 535 ntBASIC8.09□□□□□ -1.11
Rpl28P41105 Gm8652-201ENSMUST00000181363 964 ntBASIC8.09□□□□□ -1.11
Rpl28P41105 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Rpl28P41105 Rgr-203ENSMUST00000225070 4704 ntBASIC8.09□□□□□ -1.11
Rpl28P41105 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.09□□□□□ -1.11
Rpl28P41105 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rpl28P41105 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Rpl28P41105 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC8.09□□□□□ -1.12
Rpl28P41105 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC8.09□□□□□ -1.12
Rpl28P41105 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Rpl28P41105 Gm9466-201ENSMUST00000218144 2246 ntBASIC8.09□□□□□ -1.12
Rpl28P41105 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.09□□□□□ -1.12
Rpl28P41105 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Rpl28P41105 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
Rpl28P41105 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Rpl28P41105 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Gm9361-201ENSMUST00000198695 1507 ntBASIC8.08□□□□□ -1.12
Rpl28P41105 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Rpl28P41105 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC8.08□□□□□ -1.12
Rpl28P41105 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms