Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sftpa1P35242 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sftpa1P35242 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Sftpa1P35242 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sftpa1P35242 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sftpa1P35242 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm15004-201ENSMUST00000119192 630 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm5419-201ENSMUST00000119301 527 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm15744-201ENSMUST00000161734 213 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm3551-201ENSMUST00000190750 664 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm5100-201ENSMUST00000195631 589 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm5714-201ENSMUST00000197343 566 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.12□□□□□ -0.63
Sftpa1P35242 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm3619-201ENSMUST00000219947 775 ntBASIC11.12□□□□□ -0.63
Sftpa1P35242 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sftpa1P35242 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sftpa1P35242 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sftpa1P35242 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm22711-201ENSMUST00000116890 133 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm15207-201ENSMUST00000119259 442 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm29410-201ENSMUST00000188383 694 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm5298-201ENSMUST00000201122 892 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.11□□□□□ -0.63
Sftpa1P35242 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm26035-201ENSMUST00000083065 308 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm8325-201ENSMUST00000099086 453 ntBASIC11.11□□□□□ -0.63
Sftpa1P35242 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sftpa1P35242 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sftpa1P35242 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sftpa1P35242 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm25063-201ENSMUST00000104666 94 ntBASIC11.1□□□□□ -0.63
Sftpa1P35242 Gm23912-201ENSMUST00000104687 87 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms