Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vcam1P29533 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vcam1P29533 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vcam1P29533 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Gm7150-201ENSMUST00000122032 981 ntBASIC13.78□□□□□ -0.2
Vcam1P29533 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Gm9645-201ENSMUST00000197131 792 ntBASIC13.78□□□□□ -0.2
Vcam1P29533 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Gm6108-201ENSMUST00000208365 367 ntBASIC13.78□□□□□ -0.2
Vcam1P29533 Gm7600-201ENSMUST00000209657 785 ntBASIC13.78□□□□□ -0.2
Vcam1P29533 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.78□□□□□ -0.2
Vcam1P29533 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vcam1P29533 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vcam1P29533 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vcam1P29533 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vcam1P29533 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vcam1P29533 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vcam1P29533 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vcam1P29533 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Vcam1P29533 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
Vcam1P29533 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vcam1P29533 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vcam1P29533 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Gm15782-201ENSMUST00000121073 445 ntBASIC13.77□□□□□ -0.21
Vcam1P29533 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.77□□□□□ -0.21
Vcam1P29533 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.77□□□□□ -0.21
Vcam1P29533 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Vcam1P29533 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Vcam1P29533 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Vcam1P29533 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcam1P29533 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcam1P29533 Gm6114-201ENSMUST00000182472 968 ntBASIC13.77□□□□□ -0.21
Vcam1P29533 Gm27390-201ENSMUST00000184516 176 ntBASIC13.77□□□□□ -0.21
Vcam1P29533 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcam1P29533 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcam1P29533 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.77□□□□□ -0.21
Vcam1P29533 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.77□□□□□ -0.21
Vcam1P29533 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.77□□□□□ -0.21
Vcam1P29533 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.77□□□□□ -0.21
Vcam1P29533 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.77□□□□□ -0.21
Vcam1P29533 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vcam1P29533 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vcam1P29533 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.77□□□□□ -0.21
Vcam1P29533 Olfr584-201ENSMUST00000098210 964 ntBASIC13.77□□□□□ -0.21
Vcam1P29533 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vcam1P29533 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms