Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp3P28862 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.85□□□□□ -0.35
Mmp3P28862 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Mmp3P28862 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.85□□□□□ -0.35
Mmp3P28862 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.85□□□□□ -0.35
Mmp3P28862 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.85□□□□□ -0.35
Mmp3P28862 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.85□□□□□ -0.35
Mmp3P28862 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.85□□□□□ -0.35
Mmp3P28862 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.85□□□□□ -0.35
Mmp3P28862 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.85□□□□□ -0.35
Mmp3P28862 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Mmp3P28862 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Mmp3P28862 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.85□□□□□ -0.35
Mmp3P28862 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.85□□□□□ -0.35
Mmp3P28862 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.85□□□□□ -0.35
Mmp3P28862 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp3P28862 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Mmp3P28862 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Mmp3P28862 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Mmp3P28862 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Mmp3P28862 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Mmp3P28862 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.84□□□□□ -0.35
Mmp3P28862 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.84□□□□□ -0.35
Mmp3P28862 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.84□□□□□ -0.35
Mmp3P28862 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Mmp3P28862 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Mmp3P28862 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Mmp3P28862 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Gm29499-201ENSMUST00000189151 486 ntBASIC12.84□□□□□ -0.35
Mmp3P28862 Gm28329-201ENSMUST00000191208 689 ntBASIC12.84□□□□□ -0.35
Mmp3P28862 Gm29171-201ENSMUST00000191397 486 ntBASIC12.84□□□□□ -0.35
Mmp3P28862 Gm45398-201ENSMUST00000210561 165 ntBASIC12.84□□□□□ -0.35
Mmp3P28862 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Mmp3P28862 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.84□□□□□ -0.35
Mmp3P28862 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.84□□□□□ -0.35
Mmp3P28862 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Mmp3P28862 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.84□□□□□ -0.35
Mmp3P28862 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp3P28862 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Mmp3P28862 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.83□□□□□ -0.35
Mmp3P28862 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.83□□□□□ -0.36
Mmp3P28862 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Mmp3P28862 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Mmp3P28862 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms