Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nckap1P28660 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nckap1P28660 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.01□□□□□ -0.49
Nckap1P28660 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nckap1P28660 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.01□□□□□ -0.49
Nckap1P28660 Gm10051-201ENSMUST00000145209 414 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.01□□□□□ -0.49
Nckap1P28660 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.01□□□□□ -0.49
Nckap1P28660 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Nckap1P28660 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nckap1P28660 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nckap1P28660 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nckap1P28660 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nckap1P28660 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nckap1P28660 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.01□□□□□ -0.49
Nckap1P28660 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.01□□□□□ -0.49
Nckap1P28660 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nckap1P28660 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nckap1P28660 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Nckap1P28660 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12□□□□□ -0.49
Nckap1P28660 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Gm11663-201ENSMUST00000117888 290 ntBASIC12□□□□□ -0.49
Nckap1P28660 Gm11660-201ENSMUST00000120955 412 ntBASIC12□□□□□ -0.49
Nckap1P28660 Gm4034-201ENSMUST00000187674 480 ntBASIC12□□□□□ -0.49
Nckap1P28660 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12□□□□□ -0.49
Nckap1P28660 AC125486.1-201ENSMUST00000218701 320 ntBASIC12□□□□□ -0.49
Nckap1P28660 CT009713.8-201ENSMUST00000225448 560 ntBASIC12□□□□□ -0.49
Nckap1P28660 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Gm5705-201ENSMUST00000066241 711 ntBASIC12□□□□□ -0.49
Nckap1P28660 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nckap1P28660 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Gm10702-201ENSMUST00000098929 1268 ntBASIC12□□□□□ -0.49
Nckap1P28660 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12□□□□□ -0.49
Nckap1P28660 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12□□□□□ -0.49
Nckap1P28660 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Gm43081-201ENSMUST00000199082 1380 ntBASIC12□□□□□ -0.49
Nckap1P28660 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Nckap1P28660 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Nckap1P28660 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nckap1P28660 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Nckap1P28660 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nckap1P28660 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nckap1P28660 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nckap1P28660 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms