Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Gja4P28235 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gja4P28235 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Gm22711-201ENSMUST00000116890 133 ntBASIC12.03□□□□□ -0.48
Gja4P28235 Gm12795-201ENSMUST00000117594 539 ntBASIC12.03□□□□□ -0.48
Gja4P28235 Gm11451-201ENSMUST00000118946 630 ntBASIC12.03□□□□□ -0.48
Gja4P28235 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.03□□□□□ -0.48
Gja4P28235 Gm11836-201ENSMUST00000121022 441 ntBASIC12.03□□□□□ -0.48
Gja4P28235 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Gja4P28235 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.03□□□□□ -0.48
Gja4P28235 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.03□□□□□ -0.48
Gja4P28235 Gm43520-201ENSMUST00000197996 164 ntBASIC12.03□□□□□ -0.48
Gja4P28235 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.03□□□□□ -0.48
Gja4P28235 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.03□□□□□ -0.48
Gja4P28235 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Gja4P28235 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gja4P28235 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.02□□□□□ -0.48
Gja4P28235 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gja4P28235 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gja4P28235 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.02□□□□□ -0.48
Gja4P28235 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gja4P28235 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gja4P28235 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.02□□□□□ -0.48
Gja4P28235 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gja4P28235 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gja4P28235 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gja4P28235 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gja4P28235 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.02□□□□□ -0.49
Gja4P28235 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gja4P28235 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gja4P28235 Gm1848-201ENSMUST00000120711 789 ntBASIC12.02□□□□□ -0.49
Gja4P28235 Gm12516-201ENSMUST00000120819 385 ntBASIC12.02□□□□□ -0.49
Gja4P28235 Gm16397-201ENSMUST00000122201 494 ntBASIC12.02□□□□□ -0.49
Gja4P28235 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.02□□□□□ -0.49
Gja4P28235 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.02□□□□□ -0.49
Gja4P28235 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Gm21092-201ENSMUST00000178995 955 ntBASIC12.02□□□□□ -0.49
Gja4P28235 Gm10731-201ENSMUST00000181171 448 ntBASIC12.02□□□□□ -0.49
Gja4P28235 Mir6958-201ENSMUST00000184207 73 ntBASIC12.02□□□□□ -0.49
Gja4P28235 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.02□□□□□ -0.49
Gja4P28235 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.02□□□□□ -0.49
Gja4P28235 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Gja4P28235 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gja4P28235 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.02□□□□□ -0.49
Gja4P28235 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gja4P28235 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gja4P28235 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gja4P28235 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.01□□□□□ -0.49
Gja4P28235 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gja4P28235 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gja4P28235 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gja4P28235 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.01□□□□□ -0.49
Gja4P28235 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gja4P28235 Gm12899-201ENSMUST00000120565 551 ntBASIC12.01□□□□□ -0.49
Gja4P28235 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.01□□□□□ -0.49
Gja4P28235 Mir1901-201ENSMUST00000122616 78 ntBASIC12.01□□□□□ -0.49
Gja4P28235 Gm24844-201ENSMUST00000158679 127 ntBASIC12.01□□□□□ -0.49
Gja4P28235 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Gja4P28235 Gm23153-201ENSMUST00000175323 313 ntBASIC12.01□□□□□ -0.49
Gja4P28235 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gja4P28235 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.01□□□□□ -0.49
Gja4P28235 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.01□□□□□ -0.49
Gja4P28235 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.01□□□□□ -0.49
Gja4P28235 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gja4P28235 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gja4P28235 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gja4P28235 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gja4P28235 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms