Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Pde6aP27664 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pde6aP27664 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Gm14028-201ENSMUST00000117434 479 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Pde6aP27664 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.93□□□□□ -0.18
Pde6aP27664 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.93□□□□□ -0.18
Pde6aP27664 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.93□□□□□ -0.18
Pde6aP27664 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Gm8343-201ENSMUST00000182705 994 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 Gm9192-201ENSMUST00000183221 985 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.93□□□□□ -0.18
Pde6aP27664 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.93□□□□□ -0.18
Pde6aP27664 Gm4157-201ENSMUST00000211647 679 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.93□□□□□ -0.18
Pde6aP27664 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.93□□□□□ -0.18
Pde6aP27664 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.93□□□□□ -0.18
Pde6aP27664 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6aP27664 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.92□□□□□ -0.18
Pde6aP27664 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.92□□□□□ -0.18
Pde6aP27664 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.92□□□□□ -0.18
Pde6aP27664 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.92□□□□□ -0.18
Pde6aP27664 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Pde6aP27664 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pde6aP27664 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.92□□□□□ -0.18
Pde6aP27664 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.92□□□□□ -0.18
Pde6aP27664 Gm18038-201ENSMUST00000197900 485 ntBASIC13.92□□□□□ -0.18
Pde6aP27664 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.92□□□□□ -0.18
Pde6aP27664 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.92□□□□□ -0.18
Pde6aP27664 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pde6aP27664 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6aP27664 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Pde6aP27664 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.92□□□□□ -0.18
Pde6aP27664 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pde6aP27664 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.92□□□□□ -0.18
Pde6aP27664 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.91□□□□□ -0.18
Pde6aP27664 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Pde6aP27664 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pde6aP27664 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.91□□□□□ -0.18
Pde6aP27664 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.91□□□□□ -0.18
Pde6aP27664 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pde6aP27664 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6aP27664 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pde6aP27664 Gm14277-201ENSMUST00000121195 360 ntBASIC13.91□□□□□ -0.18
Pde6aP27664 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms