Protein–RNA interactions for Protein: P21841

Sftpc, Pulmonary surfactant-associated protein C, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpcP21841 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SftpcP21841 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.89□□□□□ -0.67
SftpcP21841 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.89□□□□□ -0.67
SftpcP21841 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Gm24845-201ENSMUST00000158034 109 ntBASIC10.89□□□□□ -0.67
SftpcP21841 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.89□□□□□ -0.67
SftpcP21841 Gm38210-201ENSMUST00000191944 809 ntBASIC10.89□□□□□ -0.67
SftpcP21841 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.89□□□□□ -0.67
SftpcP21841 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.89□□□□□ -0.67
SftpcP21841 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SftpcP21841 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.89□□□□□ -0.67
SftpcP21841 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SftpcP21841 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.88□□□□□ -0.67
SftpcP21841 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.88□□□□□ -0.67
SftpcP21841 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Gm23251-201ENSMUST00000103773 110 ntBASIC10.88□□□□□ -0.67
SftpcP21841 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.88□□□□□ -0.67
SftpcP21841 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.88□□□□□ -0.67
SftpcP21841 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SftpcP21841 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.88□□□□□ -0.67
SftpcP21841 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.88□□□□□ -0.67
SftpcP21841 Gm4482-201ENSMUST00000200876 742 ntBASIC10.88□□□□□ -0.67
SftpcP21841 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 Gm5369-201ENSMUST00000217499 588 ntBASIC10.88□□□□□ -0.67
SftpcP21841 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.88□□□□□ -0.67
SftpcP21841 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.88□□□□□ -0.67
SftpcP21841 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SftpcP21841 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SftpcP21841 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SftpcP21841 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms