Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cd48P18181 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cd48P18181 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd48P18181 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.81□□□□□ -0.68
Cd48P18181 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Cd48P18181 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cd48P18181 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.8□□□□□ -0.68
Cd48P18181 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Cd48P18181 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.8□□□□□ -0.68
Cd48P18181 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cd48P18181 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.8□□□□□ -0.68
Cd48P18181 Gm14999-201ENSMUST00000121039 624 ntBASIC10.8□□□□□ -0.68
Cd48P18181 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.8□□□□□ -0.68
Cd48P18181 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.8□□□□□ -0.68
Cd48P18181 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.8□□□□□ -0.68
Cd48P18181 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cd48P18181 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cd48P18181 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.79□□□□□ -0.68
Cd48P18181 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.79□□□□□ -0.68
Cd48P18181 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Cd48P18181 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.79□□□□□ -0.68
Cd48P18181 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cd48P18181 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms