Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Ccl1P10146 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.29□□□□□ -0.92
Ccl1P10146 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ccl1P10146 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ccl1P10146 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ccl1P10146 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Gm27243-201ENSMUST00000183964 521 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Gm27306-201ENSMUST00000183970 107 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.29□□□□□ -0.92
Ccl1P10146 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.29□□□□□ -0.92
Ccl1P10146 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.29□□□□□ -0.92
Ccl1P10146 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.29□□□□□ -0.92
Ccl1P10146 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Gm18473-201ENSMUST00000220543 868 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Gm19220-201ENSMUST00000222682 803 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ccl1P10146 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Ccl1P10146 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Ccl1P10146 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Ccl1P10146 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.29□□□□□ -0.92
Ccl1P10146 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.29□□□□□ -0.92
Ccl1P10146 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Ccl1P10146 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.28□□□□□ -0.92
Ccl1P10146 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Ccl1P10146 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Ccl1P10146 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
Ccl1P10146 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Ccl1P10146 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Gm12341-201ENSMUST00000119724 503 ntBASIC9.28□□□□□ -0.92
Ccl1P10146 Gm13123-201ENSMUST00000122173 492 ntBASIC9.28□□□□□ -0.92
Ccl1P10146 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.28□□□□□ -0.92
Ccl1P10146 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
Ccl1P10146 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.28□□□□□ -0.92
Ccl1P10146 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC9.28□□□□□ -0.92
Ccl1P10146 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.28□□□□□ -0.92
Ccl1P10146 Gm42612-201ENSMUST00000197986 623 ntBASIC9.28□□□□□ -0.92
Ccl1P10146 Gm43170-201ENSMUST00000199827 612 ntBASIC9.28□□□□□ -0.92
Ccl1P10146 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.28□□□□□ -0.92
Ccl1P10146 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.28□□□□□ -0.92
Ccl1P10146 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.28□□□□□ -0.92
Ccl1P10146 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Ccl1P10146 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.28□□□□□ -0.92
Ccl1P10146 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.28□□□□□ -0.92
Ccl1P10146 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Ccl1P10146 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Ccl1P10146 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms