Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxd3P09027 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxd3P09027 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Hoxd3P09027 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.88
Hoxd3P09027 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm12997-201ENSMUST00000120207 640 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm25700-201ENSMUST00000177693 110 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm9022-201ENSMUST00000182482 992 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm5363-201ENSMUST00000211927 938 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm17611-202ENSMUST00000220613 814 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 AC126043.1-201ENSMUST00000221304 1141 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.58□□□□□ -0.88
Hoxd3P09027 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.58□□□□□ -0.88
Hoxd3P09027 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Hoxd3P09027 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.57□□□□□ -0.88
Hoxd3P09027 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.57□□□□□ -0.88
Hoxd3P09027 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.57□□□□□ -0.88
Hoxd3P09027 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Hoxd3P09027 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm13296-201ENSMUST00000117854 997 ntBASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm5909-201ENSMUST00000119768 1281 ntBASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm16570-201ENSMUST00000161951 436 ntBASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm6047-201ENSMUST00000167221 574 ntBASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Hoxd3P09027 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Hoxd3P09027 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms