Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04213 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.52□□□□□ -0.57
P04213 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
P04213 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04213 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
P04213 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04213 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
P04213 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
P04213 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.52□□□□□ -0.57
P04213 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
P04213 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
P04213 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
P04213 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.51□□□□□ -0.57
P04213 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P04213 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P04213 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.51□□□□□ -0.57
P04213 Gm11989-201ENSMUST00000117240 672 ntBASIC11.51□□□□□ -0.57
P04213 Gm12241-201ENSMUST00000118330 726 ntBASIC11.51□□□□□ -0.57
P04213 Gm11362-201ENSMUST00000118838 850 ntBASIC11.51□□□□□ -0.57
P04213 Gm15610-201ENSMUST00000120584 195 ntBASIC11.51□□□□□ -0.57
P04213 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.51□□□□□ -0.57
P04213 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
P04213 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.51□□□□□ -0.57
P04213 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.51□□□□□ -0.57
P04213 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.51□□□□□ -0.57
P04213 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.51□□□□□ -0.57
P04213 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.51□□□□□ -0.57
P04213 Gm9368-201ENSMUST00000219348 831 ntBASIC11.51□□□□□ -0.57
P04213 Cts7-204ENSMUST00000225321 1257 ntBASIC11.51□□□□□ -0.57
P04213 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P04213 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
P04213 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.51□□□□□ -0.57
P04213 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
P04213 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P04213 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
P04213 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.5□□□□□ -0.57
P04213 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
P04213 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.5□□□□□ -0.57
P04213 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.5□□□□□ -0.57
P04213 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
P04213 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.5□□□□□ -0.57
P04213 Gm14441-201ENSMUST00000121960 540 ntBASIC11.5□□□□□ -0.57
P04213 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Gm5070-201ENSMUST00000177599 862 ntBASIC11.5□□□□□ -0.57
P04213 Gm3096-201ENSMUST00000185770 364 ntBASIC11.5□□□□□ -0.57
P04213 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.5□□□□□ -0.57
P04213 Gm31256-201ENSMUST00000194705 506 ntBASIC11.5□□□□□ -0.57
P04213 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.5□□□□□ -0.57
P04213 Gm45865-201ENSMUST00000211815 945 ntBASIC11.5□□□□□ -0.57
P04213 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.5□□□□□ -0.57
P04213 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
P04213 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.5□□□□□ -0.57
P04213 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04213 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms