Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
CopeO89079 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.39□□□□□ -0.43
CopeO89079 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.39□□□□□ -0.43
CopeO89079 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
CopeO89079 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Gm3890-201ENSMUST00000182416 207 ntBASIC12.39□□□□□ -0.43
CopeO89079 Gm29127-201ENSMUST00000188304 517 ntBASIC12.39□□□□□ -0.43
CopeO89079 Gm37201-201ENSMUST00000191845 523 ntBASIC12.39□□□□□ -0.43
CopeO89079 Gm9136-201ENSMUST00000193368 454 ntBASIC12.39□□□□□ -0.43
CopeO89079 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.39□□□□□ -0.43
CopeO89079 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.39□□□□□ -0.43
CopeO89079 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopeO89079 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CopeO89079 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CopeO89079 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.38□□□□□ -0.43
CopeO89079 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Gm4984-201ENSMUST00000115987 360 ntBASIC12.38□□□□□ -0.43
CopeO89079 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Gm13570-201ENSMUST00000140763 309 ntBASIC12.38□□□□□ -0.43
CopeO89079 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.38□□□□□ -0.43
CopeO89079 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.38□□□□□ -0.43
CopeO89079 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.38□□□□□ -0.43
CopeO89079 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.38□□□□□ -0.43
CopeO89079 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CopeO89079 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.38□□□□□ -0.43
CopeO89079 Gm18711-201ENSMUST00000199341 750 ntBASIC12.38□□□□□ -0.43
CopeO89079 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Gm9794-201ENSMUST00000202370 423 ntBASIC12.38□□□□□ -0.43
CopeO89079 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.38□□□□□ -0.43
CopeO89079 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.38□□□□□ -0.43
CopeO89079 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.38□□□□□ -0.43
CopeO89079 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CopeO89079 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CopeO89079 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CopeO89079 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CopeO89079 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CopeO89079 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopeO89079 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CopeO89079 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.37□□□□□ -0.43
CopeO89079 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CopeO89079 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.37□□□□□ -0.43
CopeO89079 Gm25927-201ENSMUST00000175058 117 ntBASIC12.37□□□□□ -0.43
CopeO89079 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CopeO89079 Gm6222-202ENSMUST00000182143 629 ntBASIC12.37□□□□□ -0.43
CopeO89079 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.37□□□□□ -0.43
CopeO89079 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.37□□□□□ -0.43
CopeO89079 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.37□□□□□ -0.43
CopeO89079 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopeO89079 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.37□□□□□ -0.43
CopeO89079 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms