Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.23□□□□□ -0.45
Limk2O54785 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.23□□□□□ -0.45
Limk2O54785 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Limk2O54785 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Limk2O54785 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Limk2O54785 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.22□□□□□ -0.45
Limk2O54785 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Gm5419-201ENSMUST00000119301 527 ntBASIC12.22□□□□□ -0.45
Limk2O54785 Gm15610-201ENSMUST00000120584 195 ntBASIC12.22□□□□□ -0.45
Limk2O54785 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.22□□□□□ -0.45
Limk2O54785 Gm7003-201ENSMUST00000195089 312 ntBASIC12.22□□□□□ -0.45
Limk2O54785 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.22□□□□□ -0.45
Limk2O54785 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.22□□□□□ -0.45
Limk2O54785 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Limk2O54785 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Limk2O54785 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Limk2O54785 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Limk2O54785 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Limk2O54785 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.21□□□□□ -0.45
Limk2O54785 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.21□□□□□ -0.45
Limk2O54785 Gm18734-201ENSMUST00000172937 808 ntBASIC12.21□□□□□ -0.45
Limk2O54785 Gm37835-201ENSMUST00000193305 361 ntBASIC12.21□□□□□ -0.45
Limk2O54785 Gm17931-201ENSMUST00000208132 634 ntBASIC12.21□□□□□ -0.45
Limk2O54785 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Spcs1-203ENSMUST00000226374 592 ntBASIC12.21□□□□□ -0.45
Limk2O54785 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Limk2O54785 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.21□□□□□ -0.45
Limk2O54785 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Limk2O54785 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Limk2O54785 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Limk2O54785 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Limk2O54785 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.21□□□□□ -0.46
Limk2O54785 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Limk2O54785 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Limk2O54785 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.2□□□□□ -0.46
Limk2O54785 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.2□□□□□ -0.46
Limk2O54785 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Limk2O54785 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Limk2O54785 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Limk2O54785 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.2□□□□□ -0.46
Limk2O54785 Gm9062-201ENSMUST00000117712 727 ntBASIC12.2□□□□□ -0.46
Limk2O54785 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Limk2O54785 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms