Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Gm17192-201ENSMUST00000169031 511 ntBASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Gm7741-201ENSMUST00000181445 989 ntBASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Gm28324-201ENSMUST00000187913 264 ntBASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Gm10305-201ENSMUST00000195331 2475 ntBASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcf11G3X9Z4 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Gm12628-201ENSMUST00000122193 382 ntBASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 AC238811.4-201ENSMUST00000178019 1246 ntBASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 AC238940.3-201ENSMUST00000178830 1246 ntBASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcf11G3X9Z4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm20633-201ENSMUST00000176742 2831 ntBASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm25148-201ENSMUST00000104611 123 ntBASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm10169-201ENSMUST00000121822 348 ntBASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcf11G3X9Z4 Gm27177-202ENSMUST00000183514 2703 ntBASIC17.9■□□□□ 0.46
Pcf11G3X9Z4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcf11G3X9Z4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms