Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm12247-201ENSMUST00000117585 670 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm13445-201ENSMUST00000121664 307 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm12453-201ENSMUST00000121981 331 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm17070-201ENSMUST00000170463 784 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm9507-202ENSMUST00000180157 654 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm43671-201ENSMUST00000200422 433 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm6855-201ENSMUST00000206307 790 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Colca2F8VPY8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Colca2F8VPY8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm13422-201ENSMUST00000118834 504 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm13019-201ENSMUST00000120000 276 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm16219-201ENSMUST00000120096 274 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm5870-201ENSMUST00000196461 282 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm43610-201ENSMUST00000199117 365 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm18041-201ENSMUST00000218210 618 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm5468-202ENSMUST00000227851 682 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.31□□□□□ -0.6
Colca2F8VPY8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Colca2F8VPY8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Colca2F8VPY8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms