Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Gm15610-201ENSMUST00000120584 195 ntBASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Gm6013-201ENSMUST00000212264 699 ntBASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh9F8VPK8 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm38241-201ENSMUST00000192641 898 ntBASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh9F8VPK8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm4986-201ENSMUST00000119731 549 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm13786-201ENSMUST00000122371 333 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm29396-201ENSMUST00000185659 716 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm5950-201ENSMUST00000213337 772 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm10608-202ENSMUST00000213924 676 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh9F8VPK8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms