Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm13422-201ENSMUST00000118834 504 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm25492-201ENSMUST00000157383 129 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Mir7035-201ENSMUST00000184713 82 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm44814-201ENSMUST00000207018 434 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Gm7525-201ENSMUST00000219425 454 ntBASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc188F6WEU2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm8152-201ENSMUST00000120842 637 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm5190-201ENSMUST00000192434 357 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm8197-202ENSMUST00000193422 934 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm43726-201ENSMUST00000199110 775 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm2594-201ENSMUST00000214774 742 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm2553-201ENSMUST00000215986 605 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc188F6WEU2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms