Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 AC137950.2-202ENSMUST00000227150 1635 ntBASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC16.56■□□□□ 0.24
Scaf11E9PZM7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Gm23612-201ENSMUST00000103823 110 ntBASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Gm16459-201ENSMUST00000121443 686 ntBASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Gm23576-201ENSMUST00000179918 110 ntBASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Gm2448-201ENSMUST00000207080 559 ntBASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Gm9204-201ENSMUST00000212641 947 ntBASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Gm19046-201ENSMUST00000221263 1298 ntBASIC16.55■□□□□ 0.24
Scaf11E9PZM7 AC105408.1-201ENSMUST00000227771 802 ntBASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scaf11E9PZM7 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm16030-201ENSMUST00000159098 603 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm8756-201ENSMUST00000183250 929 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm28937-201ENSMUST00000185413 695 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm29400-201ENSMUST00000187208 695 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm28662-201ENSMUST00000188446 695 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm28251-201ENSMUST00000188835 695 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm37318-201ENSMUST00000194325 695 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm38017-201ENSMUST00000194768 695 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm37287-201ENSMUST00000195449 695 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm37793-201ENSMUST00000195548 695 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Ighv1-86-201ENSMUST00000200562 353 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm35960-201ENSMUST00000202712 767 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm26670-202ENSMUST00000226862 340 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm13700-201ENSMUST00000118624 1128 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm12337-201ENSMUST00000119634 400 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm13981-201ENSMUST00000122360 447 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Mir1905-201ENSMUST00000122779 82 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm25830-201ENSMUST00000158923 132 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm17825-201ENSMUST00000206836 794 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scaf11E9PZM7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.54■□□□□ 0.24
Scaf11E9PZM7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms