Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Gm8181-201ENSMUST00000062242 669 ntBASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sptbn4E9PX29 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm26272-201ENSMUST00000179241 132 ntBASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm9162-201ENSMUST00000182081 991 ntBASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm38151-201ENSMUST00000195085 289 ntBASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm7504-201ENSMUST00000201449 424 ntBASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm5291-201ENSMUST00000201965 899 ntBASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 CT571271.1-201ENSMUST00000227071 670 ntBASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sptbn4E9PX29 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Sptbn4E9PX29 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.74□□□□□ -0.69
Sptbn4E9PX29 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Sptbn4E9PX29 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sptbn4E9PX29 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.74□□□□□ -0.69
Sptbn4E9PX29 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.74□□□□□ -0.69
Sptbn4E9PX29 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Sptbn4E9PX29 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.74□□□□□ -0.69
Sptbn4E9PX29 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sptbn4E9PX29 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sptbn4E9PX29 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms