Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.95□□□□□ -0.66
Gm3543D3Z235 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm35960-201ENSMUST00000202712 767 ntBASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm5363-201ENSMUST00000211927 938 ntBASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm39404-201ENSMUST00000216350 313 ntBASIC10.95□□□□□ -0.66
Gm3543D3Z235 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Cog3-203ENSMUST00000227473 4197 ntBASIC10.95□□□□□ -0.66
Gm3543D3Z235 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm3543D3Z235 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm14832-201ENSMUST00000121289 322 ntBASIC10.94□□□□□ -0.66
Gm3543D3Z235 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.94□□□□□ -0.66
Gm3543D3Z235 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.94□□□□□ -0.66
Gm3543D3Z235 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.94□□□□□ -0.66
Gm3543D3Z235 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.94□□□□□ -0.66
Gm3543D3Z235 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm3543D3Z235 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.93□□□□□ -0.66
Gm3543D3Z235 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm3543D3Z235 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms