Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm37638-201ENSMUST00000194337 1123 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm43002-201ENSMUST00000200310 155 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm44008-201ENSMUST00000204345 412 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm18035-201ENSMUST00000211962 589 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm7525-201ENSMUST00000219425 454 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Gm7959-201ENSMUST00000221823 1078 ntBASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Scn7aB1AYL1 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Gm5641-201ENSMUST00000091130 1488 ntBASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Gm14270-201ENSMUST00000118388 846 ntBASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Gm20414-201ENSMUST00000172918 646 ntBASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Gm43334-201ENSMUST00000197740 1318 ntBASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scn7aB1AYL1 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Gm11980-201ENSMUST00000121445 986 ntBASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Gm29164-201ENSMUST00000185454 1024 ntBASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Gm45758-201ENSMUST00000212448 1006 ntBASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Scn7aB1AYL1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Gm44056-201ENSMUST00000204623 1427 ntBASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Gm15003-201ENSMUST00000118884 446 ntBASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Gm15329-201ENSMUST00000121408 155 ntBASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Gm4862-201ENSMUST00000170405 438 ntBASIC15.13■□□□□ 0.01
Scn7aB1AYL1 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scn7aB1AYL1 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms