Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm8566-201ENSMUST00000120174 465 ntBASIC11.79□□□□□ -0.52
Chd3B1AR17 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm4310-201ENSMUST00000177847 889 ntBASIC11.79□□□□□ -0.52
Chd3B1AR17 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm4482-201ENSMUST00000200876 742 ntBASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm45575-201ENSMUST00000210283 548 ntBASIC11.79□□□□□ -0.52
Chd3B1AR17 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chd3B1AR17 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.79□□□□□ -0.52
Chd3B1AR17 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.78□□□□□ -0.52
Chd3B1AR17 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.78□□□□□ -0.52
Chd3B1AR17 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.78□□□□□ -0.52
Chd3B1AR17 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.78□□□□□ -0.52
Chd3B1AR17 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Gm24514-201ENSMUST00000174961 285 ntBASIC11.78□□□□□ -0.52
Chd3B1AR17 Gm29499-201ENSMUST00000189151 486 ntBASIC11.78□□□□□ -0.52
Chd3B1AR17 Gm28329-201ENSMUST00000191208 689 ntBASIC11.78□□□□□ -0.52
Chd3B1AR17 Gm29171-201ENSMUST00000191397 486 ntBASIC11.78□□□□□ -0.52
Chd3B1AR17 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Chd3B1AR17 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chd3B1AR17 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd3B1AR17 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd3B1AR17 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd3B1AR17 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12616-201ENSMUST00000118594 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12624-201ENSMUST00000177615 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12621-201ENSMUST00000177760 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12615-201ENSMUST00000177970 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12622-201ENSMUST00000177975 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12627-201ENSMUST00000178412 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12625-201ENSMUST00000179122 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12614-201ENSMUST00000179586 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm12613-201ENSMUST00000180323 382 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm3508-201ENSMUST00000186012 792 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm2965-201ENSMUST00000198365 343 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm6450-201ENSMUST00000200896 574 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm26448-201ENSMUST00000082446 203 ntBASIC11.77□□□□□ -0.52
Chd3B1AR17 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chd3B1AR17 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Chd3B1AR17 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chd3B1AR17 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chd3B1AR17 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms