Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC9.68□□□□□ -0.86
Chd6A3KFM7 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC9.68□□□□□ -0.86
Chd6A3KFM7 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Chd6A3KFM7 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.68□□□□□ -0.86
Chd6A3KFM7 CT009550.1-201ENSMUST00000225750 864 ntBASIC9.68□□□□□ -0.86
Chd6A3KFM7 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Chd6A3KFM7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm15703-201ENSMUST00000120250 880 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm7572-201ENSMUST00000182616 766 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm15373-201ENSMUST00000121495 214 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm9578-201ENSMUST00000182354 753 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm43811-201ENSMUST00000202862 695 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm6108-201ENSMUST00000208365 367 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm18621-201ENSMUST00000222677 679 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 AC154461.1-201ENSMUST00000224207 1005 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.67□□□□□ -0.86
Chd6A3KFM7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Chd6A3KFM7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Chd6A3KFM7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms