Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gm23931-201ENSMUST00000103842 109 ntBASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc112A0AUP1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc112A0AUP1 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm15610-201ENSMUST00000120584 195 ntBASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm17931-201ENSMUST00000208132 634 ntBASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm19994-201ENSMUST00000217086 586 ntBASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc112A0AUP1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc112A0AUP1 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms