Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Gm13829-201ENSMUST00000119600 138 ntBASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Mir1982-201ENSMUST00000157368 74 ntBASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Snora78-201ENSMUST00000158630 128 ntBASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Gm18187-201ENSMUST00000196476 984 ntBASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc194A0A140LIT1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm25043-201ENSMUST00000158604 212 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Mospd4-201ENSMUST00000180618 576 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ccdc194A0A140LIT1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Ccdc194A0A140LIT1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms