Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm11989-201ENSMUST00000117240 672 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm14109-201ENSMUST00000118814 309 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm9899-201ENSMUST00000065519 555 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
H2afb2S4R1M3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.04□□□□□ -0.48
H2afb2S4R1M3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm17931-201ENSMUST00000208132 634 ntBASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
H2afb2S4R1M3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms