Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn8aQ9WTU3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm15566-201ENSMUST00000121130 590 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm37458-201ENSMUST00000194055 410 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm15432-201ENSMUST00000121106 195 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm20495-201ENSMUST00000173902 235 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm5982-201ENSMUST00000196234 512 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.05□□□□□ -0.48
Scn8aQ9WTU3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Mir1943-201ENSMUST00000158276 73 ntBASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Mir8115-201ENSMUST00000184992 119 ntBASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Gm7504-201ENSMUST00000201449 424 ntBASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Gm7940-201ENSMUST00000218195 769 ntBASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms