Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm11979-201ENSMUST00000119629 743 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm27910-201ENSMUST00000185004 107 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm38314-201ENSMUST00000195709 625 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm5996-201ENSMUST00000211110 718 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm45500-201ENSMUST00000211676 803 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Scn11aQ9R053 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.08□□□□□ -0.16
Scn11aQ9R053 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scn11aQ9R053 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Gm42657-201ENSMUST00000201746 211 ntBASIC14.07□□□□□ -0.16
Scn11aQ9R053 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Gm4604-201ENSMUST00000025040 390 ntBASIC14.07□□□□□ -0.16
Scn11aQ9R053 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.07□□□□□ -0.16
Scn11aQ9R053 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scn11aQ9R053 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scn11aQ9R053 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm14585-201ENSMUST00000120713 634 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm29410-201ENSMUST00000188383 694 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm42511-201ENSMUST00000196160 234 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm9645-201ENSMUST00000197131 792 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.06□□□□□ -0.16
Scn11aQ9R053 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn11aQ9R053 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms