Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clcf1Q9QZM3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clcf1Q9QZM3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clcf1Q9QZM3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Clcf1Q9QZM3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm13296-201ENSMUST00000117854 997 ntBASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm11439-201ENSMUST00000118598 409 ntBASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm5070-201ENSMUST00000177599 862 ntBASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm44262-201ENSMUST00000204969 372 ntBASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm45598-202ENSMUST00000210719 986 ntBASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
Clcf1Q9QZM3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Gm13996-201ENSMUST00000118456 430 ntBASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Gm18827-201ENSMUST00000188341 790 ntBASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Gm32999-201ENSMUST00000192693 562 ntBASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Gm44958-201ENSMUST00000203734 736 ntBASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Clcf1Q9QZM3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Clcf1Q9QZM3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Clcf1Q9QZM3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms