Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trem1Q9JKE2 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Gm22175-201ENSMUST00000175007 78 ntBASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trem1Q9JKE2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Gm16387-201ENSMUST00000180990 2632 ntBASIC10.77□□□□□ -0.68
Trem1Q9JKE2 AC117656.2-201ENSMUST00000224931 2215 ntBASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trem1Q9JKE2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm13223-201ENSMUST00000118609 747 ntBASIC10.77□□□□□ -0.69
Trem1Q9JKE2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms